Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDC27 ENSDARG00000056258

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Description

cell division cycle 27 [Source:ZFIN;Acc:ZDB-GENE-990706-2]

Location

Chromosome 3: 22,035,863-22,057,600 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132190.3	CDC27-201	3774	833aa	ENSDARP00000113979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000177169.2	CDC27-205	6059	809aa	ENSDARP00000144347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000147721.2	CDC27-203	275	67aa	ENSDARP00000123423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143197.2	CDC27-202	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139384.2	CDC27-204	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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