Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
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ID History
- Gene history

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Gene: rfc1 ENSDARG00000054799

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Description

replication factor C (activator 1) 1 [Source:NCBI gene (formerly Entrezgene);Acc:100037336]

Location

Chromosome 1: 23,243,093-23,274,038 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants) and 224 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143948.3	rfc1-201	4162	1147aa	ENSDARP00000113369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5P6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181658.1	rfc1-204	2981	193aa	ENSDARP00000156035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRM3	-
ENSDART00000146575.2	rfc1-203	660	126aa	ENSDARP00000119715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144004.2	rfc1-202	314	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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