Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: nkx2.2a ENSDARG00000053298

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Description

NK2 homeobox 2a [Source:NCBI gene (formerly Entrezgene);Acc:30697]

Location

Chromosome 17: 42,208,623-42,218,652 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues, 16 paralogues and is associated with 24 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187904.1	nkx2.2a-204	4557	273aa	ENSDARP00000153588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000180029.1	nkx2.2a-203	4321	273aa	ENSDARP00000154648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNE4	-
ENSDART00000081396.5	nkx2.2a-201	1555	273aa	ENSDARP00000075838.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNE4	-
ENSDART00000190007.1	nkx2.2a-205	1550	269aa	ENSDARP00000154455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90481	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140549.3	nkx2.2a-202	1466	269aa	ENSDARP00000117693.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90481	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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