Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RUNX3 ENSDARG00000052826

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Description

RUNX family transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]

Location

Chromosome 13: 45,092,766-45,225,980 reverse strand.

GRCz11:CM002897.2

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues, 3 paralogues and is associated with 17 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180265.1	RUNX3-203	2204	438aa	ENSDARP00000146778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161144.2	RUNX3-202	6070	424aa	ENSDARP00000136974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEA0	-
ENSDART00000138644.3	RUNX3-201	5881	250aa	ENSDARP00000117722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000163556.2	RUNX3-204	2109	424aa	ENSDARP00000141377.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEA0	-
ENSDART00000074750.7	RUNX3-205	1982	438aa	ENSDARP00000069236.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193812.1	RUNX3-206	1980	438aa	ENSDARP00000155932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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