Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBE2I ENSDARG00000052649

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Description

ubiquitin-conjugating enzyme E2Ia [Source:ZFIN;Acc:ZDB-GENE-010607-1]

Location

Chromosome 3: 45,364,849-45,373,511 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 6 transcripts (splice variants), 236 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052746.7	UBE2I-205	1491	157aa	ENSDARP00000052745.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DDJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156555.2	UBE2I-201	928	122aa	ENSDARP00000128330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P459	-
ENSDART00000153974.3	UBE2I-204	766	152aa	ENSDARP00000129135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000187282.1	UBE2I-206	600	157aa	ENSDARP00000151619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DDJ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154609.2	UBE2I-203	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000155648.2	UBE2I-202	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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