Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ca10a ENSDARG00000052644

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Description

carbonic anhydrase Xa [Source:NCBI gene (formerly Entrezgene);Acc:641327]

Location

Chromosome 12: 21,298,317-21,553,637 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 4 transcripts (splice variants), 81 orthologues, 19 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000178562.2	ca10a-204	6343	328aa	ENSDARP00000143800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N7X1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074540.6	ca10a-201	1226	328aa	ENSDARP00000069028.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N7X1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152974.2	ca10a-203	841	235aa	ENSDARP00000127454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000133188.2	ca10a-202	251	45aa	ENSDARP00000116852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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