Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: trim35-3 ENSDARG00000052255

.

Description

tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]

Location

Chromosome 3: 4,444,233-4,456,956 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 4 transcripts (splice variants), 42 orthologues and 139 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000074077.5	trim35-3-201	1414	454aa	ENSDARP00000068566.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193908.1	trim35-3-204	1338	240aa	ENSDARP00000147837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165834.2	trim35-3-202	380	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000165928.2	trim35-3-203	1177	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.