Gene: col4a5 ENSDARG00000052063

Description

collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]

Gene Synonyms

dragnet, drg, wu:fc02g11

Location

GRCz11:CM002891.2

About this gene

This gene has 2 transcripts (splice variants), 33 orthologues, 52 paralogues and is associated with 20 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000073827.7	col4a5-201	6451	1679aa	ENSDARP00000068317.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UXF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000174236.2	col4a5-202	4980	1659aa	ENSDARP00000143110.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZI9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary