Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: hp1bp3 ENSDARG00000044669

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Description

heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]

Gene Synonyms

fb73a05, fb97a12, im:7157373, wu:fb73a05, wu:fb97a12

Location

Chromosome 11: 37,612,214-37,631,714 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077496.6	hp1bp3-201	2664	599aa	ENSDARP00000071963.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000172899.2	hp1bp3-203	5096	610aa	ENSDARP00000142470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGU1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000157993.2	hp1bp3-202	681	143aa	ENSDARP00000140753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWH8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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