Gene: pacsin1b ENSDARG00000042128

Description

protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]

Location

Chromosome 6: 54,187,643-54,271,549 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues, 5 paralogues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056830.6	pacsin1b-201	2622	445aa	ENSDARP00000056829.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTA5 Q4V920	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128456.4	pacsin1b-202	2663	445aa	ENSDARP00000107643.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTA5 Q4V920	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162469.2	pacsin1b-204	1352	445aa	ENSDARP00000136926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTA5 Q4V920	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149542.2	pacsin1b-203	561	97aa	ENSDARP00000123765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: pacsin1b ENSDARG00000042128

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: pacsin1b ENSDARG00000042128

Summary

About Us

Get help

Our sister sites

Follow us