Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: smpd2a ENSDARG00000040523

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Description

sphingomyelin phosphodiesterase 2a [Source:NCBI gene (formerly Entrezgene);Acc:567548]

Location

Chromosome 23: 5,565,261-5,587,934 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 2 transcripts (splice variants), 142 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059307.7	smpd2a-201	2263	421aa	ENSDARP00000059306.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QUD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169904.3	smpd2a-202	2017	421aa	ENSDARP00000134756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QUD7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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