Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: actb1 ENSDARG00000037746

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Description

actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]

Gene Synonyms

ACTB, B-ACTZF, actba, bact, bactin1, bactzf, wu:fd18f05

Location

Chromosome 1: 8,649,099-8,653,385 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 7 transcripts (splice variants), 564 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054987.7	actb1-201	1788	375aa	ENSDARP00000054986.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193041.1	actb1-207	1215	129aa	ENSDARP00000145697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133319.3	actb1-202	1019	303aa	ENSDARP00000112639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141407.3	actb1-205	924	129aa	ENSDARP00000116418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138324.3	actb1-204	796	234aa	ENSDARP00000115259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148067.2	actb1-206	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135318.2	actb1-203	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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