Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SIRT3 ENSDARG00000035819

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Description

sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]

Location

Chromosome 7: 57,465,814-57,509,768 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051973.7	SIRT3-201	1579	357aa	ENSDARP00000051972.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L2B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000187554.1	SIRT3-204	6006	358aa	ENSDARP00000153898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QMP7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000147036.2	SIRT3-202	1201	252aa	ENSDARP00000119230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142459.2	SIRT3-203	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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