Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: calm1a ENSDARG00000021811

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Description

calmodulin 1a [Source:NCBI gene (formerly Entrezgene);Acc:406660]

Location

Chromosome 17: 26,713,111-26,721,007 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues, 23 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034580.8	calm1a-201	1576	149aa	ENSDARP00000035027.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQW3 Q6PI52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186813.1	calm1a-203	450	149aa	ENSDARP00000156858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQW3 Q6PI52	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134810.2	calm1a-202	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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