Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: h3f3a ENSDARG00000020504

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Description

H3 histone, family 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1928]

Location

Chromosome 3: 45,776,370-45,778,123 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants), 125 orthologues, 30 paralogues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146211.2	h3f3a-202	723	136aa	ENSDARP00000120344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSF5 Q6PI20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192849.1	h3f3a-203	669	136aa	ENSDARP00000154528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSF5 Q6PI20	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145937.2	h3f3a-201	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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