Gene: bdnf ENSDARG00000018817

Description

brain-derived neurotrophic factor [Source:NCBI gene (formerly Entrezgene);Acc:58118]

Location

Chromosome 7: 31,924,983-31,941,670 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 6 transcripts (splice variants), 198 orthologues, 3 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014843.6	bdnf-201	1866	270aa	ENSDARP00000010990.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NZ01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180929.1	bdnf-206	2329	270aa	ENSDARP00000152925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NZ01	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131009.3	bdnf-203	1446	270aa	ENSDARP00000108984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NZ01	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075389.4	bdnf-202	1100	239aa	ENSDARP00000069872.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144682.2	bdnf-205	869	143aa	ENSDARP00000114671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132353.2	bdnf-204	857	184aa	ENSDARP00000120771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: bdnf ENSDARG00000018817

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Gene: bdnf ENSDARG00000018817

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