Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: fbxo15 ENSDARG00000016897

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Description

F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]

Location

Chromosome 24: 15,655,069-15,669,210 forward strand.

GRCz11:CM002908.2

About this gene

This gene has 3 transcripts (splice variants), 231 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042943.8	fbxo15-201	1887	484aa	ENSDARP00000042942.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RC48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000181296.1	fbxo15-203	1982	428aa	ENSDARP00000153611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143160.2	fbxo15-202	1874	483aa	ENSDARP00000113137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGX5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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