Gene: tfa ENSDARG00000016771

Description

transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]

Gene Synonyms

cb285, gavi, id:ibd3238, id:ibd3525, sb:cb285, transferrin, trf, wu:fb57g06, wu:fb62h02, wu:fb63h10, wu:fb64h10, zgc:112154

Location

Chromosome 2: 16,780,643-16,794,710 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 7 transcripts (splice variants), 250 orthologues, 4 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108611.6	tfa-202	2219	673aa	ENSDARP00000100241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JL43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000181245.1	tfa-207	4876	687aa	ENSDARP00000151155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RRA6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000163194.2	tfa-206	4696	665aa	ENSDARP00000135247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHQ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000003845.9	tfa-201	1877	520aa	ENSDARP00000025702.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P3G0	-
ENSDART00000125647.4	tfa-204	870	249aa	ENSDARP00000110220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBJ1	-
ENSDART00000155147.2	tfa-205	768	202aa	ENSDARP00000128522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE71	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000124119.3	tfa-203	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: tfa ENSDARG00000016771

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Gene: tfa ENSDARG00000016771

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