Gene: slc4a4a ENSDARG00000013730

Description

solute carrier family 4 member 4a [Source:NCBI gene (formerly Entrezgene);Acc:568631]

Location

Chromosome 5: 45,746,457-45,877,387 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 6 transcripts (splice variants), 205 orthologues, 13 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000183714.1	slc4a4a-205	6323	1114aa	ENSDARP00000144892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q3P6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000041503.9	slc4a4a-201	6227	1082aa	ENSDARP00000041502.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000188229.1	slc4a4a-206	3417	1073aa	ENSDARP00000150925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QD45	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000124336.4	slc4a4a-202	2810	444aa	ENSDARP00000105268.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143520.2	slc4a4a-204	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136688.2	slc4a4a-203	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: slc4a4a ENSDARG00000013730

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Gene: slc4a4a ENSDARG00000013730

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