Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZMYND8 ENSDARG00000011932

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Description

protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]

Location

Chromosome 23: 9,809,540-9,864,166 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124510.4	ZMYND8-204	4741	1131aa	ENSDARP00000105974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000005015.10	ZMYND8-201	4696	1111aa	ENSDARP00000025195.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDH9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000180159.1	ZMYND8-202	4086	1111aa	ENSDARP00000157544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDH9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000187934.1	ZMYND8-203	3961	1105aa	ENSDARP00000154386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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