Gene: pomgnt2 ENSDARG00000010941

Description

protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:ZFIN;Acc:ZDB-GENE-050522-242]

Location

GRCz11:CM002900.2

About this gene

This gene has 2 transcripts (splice variants), 187 orthologues, 1 paralogue and is associated with 15 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139432.2	pomgnt2-201	2617	585aa	ENSDARP00000115932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000193303.1	pomgnt2-202	2089	578aa	ENSDARP00000151467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5NDE5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary