Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: tial1 ENSDARG00000009525

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Description

TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:NCBI gene (formerly Entrezgene);Acc:394107]

Location

Chromosome 13: 25,472,005-25,484,752 reverse strand.

GRCz11:CM002897.2

About this gene

This gene has 5 transcripts (splice variants), 105 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022799.7	tial1-201	2462	370aa	ENSDARP00000020234.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135321.3	tial1-204	1208	389aa	ENSDARP00000122887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJJ0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131403.2	tial1-202	409	131aa	ENSDARP00000119428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147774.2	tial1-205	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133619.2	tial1-203	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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