Gene: smarca2 ENSDARG00000008904

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]

Gene Synonyms

wu:fa56c07, wu:fi27f11, zgc:66238

Location

Chromosome 5: 45,138,934-45,284,136 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 4 transcripts (splice variants), 19 orthologues, 36 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000041412.9	smarca2-201	6051	1568aa	ENSDARP00000041411.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000172702.3	smarca2-204	4830	1604aa	ENSDARP00000133519.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJ25	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000113738.5	smarca2-202	823	258aa	ENSDARP00000102553.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NTB4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136002.3	smarca2-203	663	170aa	ENSDARP00000112752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PBX5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: smarca2 ENSDARG00000008904

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Gene: smarca2 ENSDARG00000008904

Summary

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