Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cpeb1b ENSDARG00000008454

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Description

cytoplasmic polyadenylation element binding protein 1b [Source:NCBI gene (formerly Entrezgene);Acc:30702]

Location

Chromosome 7: 48,240,707-48,251,235 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 4 transcripts (splice variants), 154 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098904.4	cpeb1b-202	2912	559aa	ENSDARP00000089674.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CE67 Q9YGX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000024062.9	cpeb1b-201	663	210aa	ENSDARP00000028099.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174145.2	cpeb1b-204	763	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000174024.2	cpeb1b-203	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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