Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: coro2aa ENSDARG00000005210

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Description

coronin 2Aa [Source:NCBI gene (formerly Entrezgene);Acc:323538]

Location

Chromosome 1: 26,605,065-26,654,311 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 6 transcripts (splice variants), 212 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011645.11	coro2aa-201	2854	533aa	ENSDARP00000014182.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QR96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000158193.2	coro2aa-205	2653	528aa	ENSDARP00000137370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRX7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000182040.1	coro2aa-206	1857	618aa	ENSDARP00000144803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152643.2	coro2aa-204	725	242aa	ENSDARP00000126993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152169.2	coro2aa-202	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000152306.2	coro2aa-203	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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