Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SKP2 ENSDARG00000004937

.

Description

S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]

Location

Chromosome 21: 22,347,120-22,359,336 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 5 transcripts (splice variants), 257 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101751.5	SKP2-204	2179	410aa	ENSDARP00000092527.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KP53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134320.3	SKP2-205	791	264aa	ENSDARP00000114755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140520.2	SKP2-203	705	114aa	ENSDARP00000123198.1	Nonsense mediated decay	-	-
ENSDART00000136904.2	SKP2-201	553	85aa	ENSDARP00000120703.1	Nonsense mediated decay	-	-
ENSDART00000131624.2	SKP2-202	316	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

.

Summary

.

.