Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: meis1a ENSDARG00000002937

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Description

Meis homeobox 1 a [Source:ZFIN;Acc:ZDB-GENE-020122-3]

Gene Synonyms

meis4.1a, meis4.1b

Location

Chromosome 1: 51,475,094-51,525,086 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants), 200 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028018.11	meis1a-201	2185	380aa	ENSDARP00000026780.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150433.2	meis1a-204	942	119aa	ENSDARP00000125440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WF09	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146352.3	meis1a-203	760	123aa	ENSDARP00000125224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WEE7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139705.2	meis1a-202	933	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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