Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: stxbp5a ENSDARG00000002656

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Description

syntaxin binding protein 5a (tomosyn) [Source:NCBI gene (formerly Entrezgene);Acc:556789]

Location

Chromosome 20: 31,745,949-31,905,968 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 3 transcripts (splice variants), 217 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142806.3	stxbp5a-203	7176	1128aa	ENSDARP00000114105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139417.2	stxbp5a-202	746	217aa	ENSDARP00000114325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133788.2	stxbp5a-201	656	177aa	ENSDARP00000119109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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