Gene: cacnb1 ENSDARG00000002167

Description

calcium channel, voltage-dependent, beta 1 subunit [Source:NCBI gene (formerly Entrezgene);Acc:436925]

Location

Chromosome 3: 16,157,120-16,227,683 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues, 6 paralogues and is associated with 17 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057159.8	cacnb1-202	2043	603aa	ENSDARP00000057158.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2Q551	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000111707.4	cacnb1-203	1670	478aa	ENSDARP00000098922.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG31	-
ENSDART00000012835.9	cacnb1-201	1563	520aa	ENSDARP00000013850.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000130611.2	cacnb1-205	1554	517aa	ENSDARP00000108239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000127275.3	cacnb1-204	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: cacnb1 ENSDARG00000002167

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Gene: cacnb1 ENSDARG00000002167

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