Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: gata6 ENSDARG00000103589

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Description

GATA binding protein 6 [Source:NCBI gene (formerly Entrezgene);Acc:58076]

Location

Chromosome 2: 4,207,209-4,217,887 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 3 transcripts (splice variants), 190 orthologues, 9 paralogues and is associated with 20 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166476.2	gata6-202	2427	501aa	ENSDARP00000137653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NW63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157903.2	gata6-201	2054	501aa	ENSDARP00000136299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NW63	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167906.2	gata6-203	1797	401aa	ENSDARP00000129963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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