Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: nphp3 ENSDARG00000078261

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Description

nephronophthisis 3 [Source:NCBI gene (formerly Entrezgene);Acc:562601]

Location

Chromosome 24: 9,612,218-9,683,374 forward strand.

GRCz11:CM002908.2

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues, 4 paralogues and is associated with 20 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110629.4	nphp3-201	4554	1303aa	ENSDARP00000101271.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P0CI65	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142460.4	nphp3-202	4536	1297aa	ENSDARP00000119076.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000175671.2	nphp3-203	4385	1291aa	ENSDARP00000143907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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