Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: lrig1 ENSDARG00000075625

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Description

leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]

Location

Chromosome 11: 16,329,776-16,395,956 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 6 transcripts (splice variants), 204 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000115085.4	lrig1-201	7283	1022aa	ENSDARP00000098283.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179925.1	lrig1-205	2997	998aa	ENSDARP00000147892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000180981.1	lrig1-206	2997	998aa	ENSDARP00000147144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000165121.2	lrig1-203	416	138aa	ENSDARP00000141913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000169070.2	lrig1-204	921	165aa	ENSDARP00000138833.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000161129.2	lrig1-202	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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