Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ttc39a ENSDARG00000074126

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Description

tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]

Location

Chromosome 8: 16,470,358-16,515,127 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146469.3	ttc39a-203	2600	598aa	ENSDARP00000120133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QD50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000108659.4	ttc39a-201	1788	595aa	ENSDARP00000098166.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132681.2	ttc39a-202	842	222aa	ENSDARP00000112780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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