Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: p4ha1b ENSDARG00000071082

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Description

prolyl 4-hydroxylase, alpha polypeptide I b [Source:NCBI gene (formerly Entrezgene);Acc:100003675]

Location

Chromosome 17: 20,144,626-20,167,236 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 2 transcripts (splice variants), 200 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104874.4	p4ha1b-201	2371	536aa	ENSDARP00000095644.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVE9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000191995.1	p4ha1b-202	5178	536aa	ENSDARP00000149102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RN68	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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