Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: hpcal4 ENSDARG00000070491

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Description

hippocalcin like 4 [Source:NCBI gene (formerly Entrezgene);Acc:564909]

Location

Chromosome 19: 30,517,311-30,565,122 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 3 transcripts (splice variants), 254 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103506.5	hpcal4-201	576	191aa	ENSDARP00000094282.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPW8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000185650.1	hpcal4-203	5892	191aa	ENSDARP00000152998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171006.3	hpcal4-202	5718	191aa	ENSDARP00000132349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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