Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: arfip1 ENSDARG00000070055

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Description

ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:NCBI gene (formerly Entrezgene);Acc:100003895]

Location

Chromosome 1: 25,442,699-25,486,571 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants), 213 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102501.5	arfip1-201	1629	339aa	ENSDARP00000093278.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141892.3	arfip1-204	1885	446aa	ENSDARP00000121937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8M3	-
ENSDART00000134200.2	arfip1-203	949	269aa	ENSDARP00000116340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131628.2	arfip1-202	957	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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