Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cachd1 ENSDARG00000061590

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Description

cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]

Location

Chromosome 6: 31,590,751-31,739,709 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 2 transcripts (splice variants), 215 orthologues, 9 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087964.7	cachd1-201	3873	1290aa	ENSDARP00000082397.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5Q0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153988.3	cachd1-202	4693	1211aa	ENSDARP00000129386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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