Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: myo1cb ENSDARG00000061579

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Description

myosin Ic, paralog b [Source:NCBI gene (formerly Entrezgene);Acc:566459]

Location

Chromosome 15: 28,268,135-28,352,897 forward strand.

GRCz11:CM002899.2

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues, 73 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152777.3	myo1cb-203	6430	1028aa	ENSDARP00000126580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3APY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000188550.1	myo1cb-205	4623	1068aa	ENSDARP00000149786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9G7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000175860.2	myo1cb-204	3210	1069aa	ENSDARP00000143801.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9H2	-
ENSDART00000087926.6	myo1cb-201	3132	1043aa	ENSDARP00000082359.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5R7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000152536.3	myo1cb-202	679	114aa	ENSDARP00000126947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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