Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: trpm5 ENSDARG00000059792

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Description

transient receptor potential cation channel, subfamily M, member 5 [Source:NCBI gene (formerly Entrezgene);Acc:557722]

Location

Chromosome 7: 48,667,081-48,702,051 forward strand.

GRCz11:CM002891.2

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083473.7	trpm5-201	4576	1214aa	ENSDARP00000077908.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157917.2	trpm5-202	4121	1165aa	ENSDARP00000132106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	S5UH55	-
ENSDART00000185580.1	trpm5-204	3860	1160aa	ENSDARP00000154970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QPK7	-
ENSDART00000174084.2	trpm5-203	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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