Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pcdh1g9 ENSDARG00000057519

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Description

protocadherin 1 gamma 9 [Source:NCBI gene (formerly Entrezgene);Acc:553997]

Location

Chromosome 10: 21,701,551-21,820,133 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 4 transcripts (splice variants), 219 orthologues and 64 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000183782.1	pcdh1g9-204	4463	970aa	ENSDARP00000154138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000090748.6	pcdh1g9-201	2911	891aa	ENSDARP00000085181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161107.2	pcdh1g9-203	4472	638aa	ENSDARP00000134389.1	Nonsense mediated decay	-
ENSDART00000158138.2	pcdh1g9-202	838	137aa	ENSDARP00000137403.1	Nonsense mediated decay	-

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Summary

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