Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sypl2a ENSDARG00000055307

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Description

synaptophysin-like 2a [Source:NCBI gene (formerly Entrezgene);Acc:393640]

Location

Chromosome 11: 36,355,348-36,376,073 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 198 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145427.3	sypl2a-201	4630	235aa	ENSDARP00000115067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161026.2	sypl2a-202	487	38aa	ENSDARP00000137278.1	Nonsense mediated decay	-	-

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Summary

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