Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ccdc43 ENSDARG00000054446

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Description

coiled-coil domain containing 43 [Source:NCBI gene (formerly Entrezgene);Acc:393631]

Location

Chromosome 3: 31,600,593-31,605,331 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000076640.6	ccdc43-201	2260	213aa	ENSDARP00000071111.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148189.3	ccdc43-203	985	163aa	ENSDARP00000112860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000145148.2	ccdc43-202	602	92aa	ENSDARP00000115220.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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