Gene: ccdc88c ENSDARG00000053713

Description

coiled-coil domain containing 88C [Source:NCBI gene (formerly Entrezgene);Acc:553231]

Location

GRCz11:CM002901.2

About this gene

This gene has 2 transcripts (splice variants), 288 orthologues, 6 paralogues and is associated with 7 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062010.5	ccdc88c-201	7789	1997aa	ENSDARP00000062009.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB13ABE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000187996.1	ccdc88c-202	9374	2023aa	ENSDARP00000149375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QCI3-1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary