Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: opn1lw1 ENSDARG00000044862

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Description

opsin 1 (cone pigments), long-wave-sensitive, 1 [Source:NCBI gene (formerly Entrezgene);Acc:30413]

Gene Synonyms

LWS-1, lws1, rdops, zfred

Location

Chromosome 11: 25,477,643-25,480,037 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 236 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065941.6	opn1lw1-201	1699	357aa	ENSDARP00000065940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N9N7J4 Q9W6A7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161664.2	opn1lw1-202	127	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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