Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: atg9a ENSDARG00000044551

.

Description

ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:NCBI gene (formerly Entrezgene);Acc:100009663]

Location

Chromosome 6: 11,249,706-11,267,002 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065411.7	atg9a-201	3116	846aa	ENSDARP00000065410.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193287.1	atg9a-205	6033	871aa	ENSDARP00000147795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186547.1	atg9a-204	5168	846aa	ENSDARP00000148935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCA8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132677.3	atg9a-202	738	162aa	ENSDARP00000113997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137122.2	atg9a-203	539	99aa	ENSDARP00000122261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.