Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: nrxn3a ENSDARG00000043746

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Description

neurexin 3a [Source:NCBI gene (formerly Entrezgene);Acc:563598]

Location

Chromosome 17: 16,906,523-17,447,902 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 8 transcripts (splice variants), 259 orthologues and 54 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000156928.2	nrxn3a-208	4008	1111aa	ENSDARP00000127605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000064241.7	nrxn3a-201	3623	672aa	ENSDARP00000064240.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153697.3	nrxn3a-203	2408	469aa	ENSDARP00000127921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000109034.4	nrxn3a-202	2099	261aa	ENSDARP00000101280.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000154519.3	nrxn3a-204	2987	197aa	ENSDARP00000127538.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000155341.2	nrxn3a-206	776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000156391.2	nrxn3a-207	788	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000155007.2	nrxn3a-205	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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