Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: prkchb ENSDARG00000043243

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Description

protein kinase C, eta, b [Source:NCBI gene (formerly Entrezgene);Acc:556591]

Location

Chromosome 20: 20,360,337-20,410,127 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 4 transcripts (splice variants), 160 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063483.5	prkchb-201	2198	676aa	ENSDARP00000063482.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000190747.1	prkchb-203	5725	702aa	ENSDARP00000152159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185065.1	prkchb-202	5647	676aa	ENSDARP00000148245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q5P7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000192177.1	prkchb-204	5324	702aa	ENSDARP00000153025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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