Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: smox ENSDARG00000036967

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Description

spermine oxidase [Source:NCBI gene (formerly Entrezgene);Acc:387290]

Location

Chromosome 1: 41,849,152-41,865,986 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 6 transcripts (splice variants), 210 orthologues, 9 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053685.6	smox-201	2220	539aa	ENSDARP00000053684.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A458	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192672.1	smox-206	568	182aa	ENSDARP00000145065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148388.2	smox-205	965	216aa	ENSDARP00000124113.1	Nonsense mediated decay	-	-
ENSDART00000145170.2	smox-204	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136879.3	smox-203	774	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000124874.4	smox-202	1902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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