Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sat1a.1 ENSDARG00000035652

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Description

spermidine/spermine N1-acetyltransferase 1a, duplicate 1 [Source:NCBI gene (formerly Entrezgene);Acc:565700]

Location

Chromosome 5: 4,332,220-4,342,866 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 4 transcripts (splice variants), 159 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051699.7	sat1a.1-201	810	171aa	ENSDARP00000051698.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8U3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141866.3	sat1a.1-203	687	96aa	ENSDARP00000124410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000147691.3	sat1a.1-204	896	88aa	ENSDARP00000115154.1	Nonsense mediated decay	-	-
ENSDART00000139409.2	sat1a.1-202	957	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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