Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pdlim5b ENSDARG00000027600

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Description

PDZ and LIM domain 5b [Source:NCBI gene (formerly Entrezgene);Acc:393165]

Location

Chromosome 10: 1,187,653-1,276,046 reverse strand.

GRCz11:CM002894.2

About this gene

This gene has 3 transcripts (splice variants), 220 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000169779.2	pdlim5b-203	2262	628aa	ENSDARP00000137887.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000036090.7	pdlim5b-201	1902	628aa	ENSDARP00000035494.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168127.2	pdlim5b-202	594	197aa	ENSDARP00000139485.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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